Project

Reverse Dependencies for bones

The projects listed here declare bones as a runtime or development dependency

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Semantic Signatures® are a new way of representing and analyzing semantic information (meaning) in text. Semantic Signatures, produced by TextWise’s Trainable Semantic Vectors (TSV) technology, provide a rich semantic representation of the multiple concepts and topics contained in a body of text. Semantic Signatures can be constructed for a wide range of texts including individual words, phrases, word lists (e.g. metadata), short passages (such as text advertisements or image labels), web pages, or full text documents (e.g. technical articles).
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Logging is a flexible logging library for use in Ruby programs based on the design of Java's log4j library. It features a hierarchical logging system, custom level names, multiple output destinations per log event, custom formatting, and more.
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ALPHA Alert -- just uploaded initial release. Linux inotify is a means to receive events describing file system activity (create, modify, delete, close, etc). Sinotify was derived from aredridel's package (http://raa.ruby-lang.org/project/ruby-inotify/), with the addition of Paul Boon's tweak for making the event_check thread more polite (see http://www.mindbucket.com/2009/02/24/ruby-daemons-verifying-good-behavior/) In sinotify, the classes Sinotify::PrimNotifier and Sinotify::PrimEvent provide a low level wrapper to inotify, with the ability to establish 'watches' and then listen for inotify events using one of inotify's synchronous event loops, and providing access to the events' masks (see 'man inotify' for details). Sinotify::PrimEvent class adds a little semantic sugar to the event in to the form of 'etypes', which are just ruby symbols that describe the event mask. If the event has a raw mask of (DELETE_SELF & IS_DIR), then the etypes array would be [:delete_self, :is_dir]. In addition to the 'straight' wrapper in inotify, sinotify provides an asynchronous implementation of the 'observer pattern' for notification. In other words, Sinotify::Notifier listens in the background for inotify events, adapting them into instances of Sinotify::Event as they come in and immediately placing them in a concurrent queue, from which they are 'announced' to 'subscribers' of the event. [Sinotify uses the 'cosell' implementation of the Announcements event notification framework, hence the terminology 'subscribe' and 'announce' rather then 'listen' and 'trigger' used in the standard event observer pattern. See the 'cosell' package on github for details.] A variety of 'knobs' are provided for controlling the behavior of the notifier: whether a watch should apply to a single directory or should recurse into subdirectores, how fast it should broadcast queued events, etc (see Sinotify::Notifier, and the example in the synopsis section below). An event 'spy' can also be setup to log all Sinotify::PrimEvents and Sinotify::Events. Sinotify::Event simplifies inotify's muddled event model, sending events only for those files/directories that have changed. That's not to say you can't setup a notifier that recurses into subdirectories, just that any individual event will apply to a single file, and not to its children. Also, event types are identified using words (in the form of ruby :symbols) instead of inotify's event masks. See Sinotify::Event for more explanation. The README for inotify: http://www.kernel.org/pub/linux/kernel/people/rml/inotify/README Selected quotes from the README for inotify: * "Rumor is that the 'd' in 'dnotify' does not stand for 'directory' but for 'suck.'" * "The 'i' in inotify does not stand for 'suck' but for 'inode' -- the logical choice since inotify is inode-based." (The 's' in 'sinotify' does in fact stand for 'suck.')
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Slipmate is a web based order fulfillment application that gives you control over advanced order routing and shipping.
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Repository is gone
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System-On-Chip Maker: a tool to design and create SoCs in a simple way, written in Ruby.
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SQL manipulation without a db connection
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SQrbL was created to help manage an extremely specific problem: managing SQL-based database conversions. In essence, SQrbL is a tool for managing multiple SQL queries using Ruby. SQrbL borrows some terminology and ideas from ActiveRecord's schema migrations, but where ActiveRecord manages changes to your database schema over time, SQrbL was written to manage the process of transforming your data from one schema to another. (Of course, you could use SQrbL for the former case as well -- just use it to write DDL queries -- but ActiveRecord has better tools for figuring out which migrations have already been applied.)
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A quick and simple manager for running programs as services on win32. Makes use of / requires the SRVANY.exe from the Windows Resource Kit.
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Mix collections of files while maintaining complete separation.
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Transliterate from Mandarin to Pinyin
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Surpass is writing (and eventually reading) excel workbooks in pure Ruby. Surpass is based on xlwt (and pyExcelerator). For comprehensive documentation, please refer to the PDF manual which is available from http://surpass.rubyforge.org or in the root directory of the source code repository. If you like to learn from playing with working examples, then there are plenty in the examples/ and webby/examples directories of the source code.
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An EventMachine[http://rubyeventmachine.com/] based library for interacting with the very cool Redis[http://code.google.com/p/redis/] data store by Salvatore 'antirez' Sanfilippo. Modeled after eventmachine's implementation of the memcached protocol, and influenced by Ezra Zygmuntowicz's {redis-rb}[http://github.com/ezmobius/redis-rb/tree/master] library (distributed as part of Redis). This library is only useful when used as part of an application that relies on Event Machine's event loop. It implements an EM-based client protocol, which leverages the non-blocking nature of the EM interface to acheive significant parallelization without threads. WARNING: this library is my first attempt to write an evented client protocol, and isn't currently used in production anywhere. All that bit in the license about not being warranted to work for any particular purpose really applies.
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Cosell is a minimal implementation of the 'Announcements' observer framework, originally introduced in VisualWorks Smalltalk as a replacement for 'triggerEvent' style of event notification. Instead of triggering events identified by symbols, the events are first class objects. For rationale, please see the original blog posting by Vassili Bykov (refs below). *Lineage* This implementation is loosely based on Lukas Renggli's tweak of Colin Putney's Squeak implementation of Vassili Bykov's Announcements framework for VisualWorks Smalltalk. (Specifically Announcements-lr.13.mcz was used as a reference.) Liberties where taken during the port. In particular, the Announcer class in the Smalltalk version is implemented here as a ruby module which can be mixed into any object. Also, in this implementation any object (or class) can serve as an announcement, so no Announcement class is implemented. The ability to queue announcements in the background is built into cosell. <b>The Name 'Cosell'</b> I chose the name 'Cosell' because a. Howard Cosell is an iconic event announcer b. Googling for 'Ruby Announcements', 'Ruby Event Announcements', etc., produced scads of results about ruby meetups, conferences, and the like. So I went with something a bit cryptic but hopefully a little more searchable. *See* * {Original blog posting describing Announcments by Vassili Bykov}[http://www.cincomsmalltalk.com/userblogs/vbykov/blogView?entry=3310034894] * {More info on the Announcements Framework}[http://wiki.squeak.org/squeak/5734]
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ALPHA Alert -- just uploaded initial release. Linux inotify is a means to receive events describing file system activity (create, modify, delete, close, etc). Sinotify was derived from aredridel's package (http://raa.ruby-lang.org/project/ruby-inotify/), with the addition of Paul Boon's tweak for making the event_check thread more polite (see http://www.mindbucket.com/2009/02/24/ruby-daemons-verifying-good-behavior/) In sinotify, the classes Sinotify::PrimNotifier and Sinotify::PrimEvent provide a low level wrapper to inotify, with the ability to establish 'watches' and then listen for inotify events using one of inotify's synchronous event loops, and providing access to the events' masks (see 'man inotify' for details). Sinotify::PrimEvent class adds a little semantic sugar to the event in to the form of 'etypes', which are just ruby symbols that describe the event mask. If the event has a raw mask of (DELETE_SELF & IS_DIR), then the etypes array would be [:delete_self, :is_dir]. In addition to the 'straight' wrapper in inotify, sinotify provides an asynchronous implementation of the 'observer pattern' for notification. In other words, Sinotify::Notifier listens in the background for inotify events, adapting them into instances of Sinotify::Event as they come in and immediately placing them in a concurrent queue, from which they are 'announced' to 'subscribers' of the event. [Sinotify uses the 'cosell' implementation of the Announcements event notification framework, hence the terminology 'subscribe' and 'announce' rather then 'listen' and 'trigger' used in the standard event observer pattern. See the 'cosell' package on github for details.] A variety of 'knobs' are provided for controlling the behavior of the notifier: whether a watch should apply to a single directory or should recurse into subdirectores, how fast it should broadcast queued events, etc (see Sinotify::Notifier, and the example in the synopsis section below). An event 'spy' can also be setup to log all Sinotify::PrimEvents and Sinotify::Events. Sinotify::Event simplifies inotify's muddled event model, sending events only for those files/directories that have changed. That's not to say you can't setup a notifier that recurses into subdirectories, just that any individual event will apply to a single file, and not to its children. Also, event types are identified using words (in the form of ruby :symbols) instead of inotify's event masks. See Sinotify::Event for more explanation. The README for inotify: http://www.kernel.org/pub/linux/kernel/people/rml/inotify/README Selected quotes from the README for inotify: * "Rumor is that the 'd' in 'dnotify' does not stand for 'directory' but for 'suck.'" * "The 'i' in inotify does not stand for 'suck' but for 'inode' -- the logical choice since inotify is inode-based." (The 's' in 'sinotify' does in fact stand for 'suck.')
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Synapse is a web application framework that does practically nothing. Basically this is just a tiny wrapper for the Rack::Router (see http://github.com/carllerche/rack-router) very alpha-ish stuff here. Seems to work though.
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Synfeld is a web application framework that does practically nothing. Synfeld is little more than a small wrapper for Rack::Mount (see http://github.com/josh/rack-mount). If you want a web framework that is mostly just going to serve up json blobs, and occasionally serve up some simple content (eg. help files) and media, Synfeld makes that easy. The sample app below shows pretty much everything there is to know about synfeld, in particular: * How to define routes. * Simple rendering of erb, haml, html, json, and static files. * In the case of erb and haml, passing variables into the template is demonstrated. * A dynamic action where the status code, headers, and body are created 'manually' (/my/special/route below) * A simple way of creating format sensitive routes (/alphabet.html vs. /alphabet.json) * The erb demo link also demos the rendering of a partial (not visible in the code below, you have to look at the template file examples/public/erb_files/erb_test.erb).
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Simple DSL to define parser for flat files formats common in biofinformatics, such as Swissprot, Uniprot, KEGG, TREMBL, etc. SwissParser API was changed in its version 1.0.0 to simplify parser definition. The code was tested on entire Uniprot and KEGG releases and functional testing guarantees that existing features will not break after an update.
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Create fancy command line tables with ease.
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Tanning Bed is Solr for models. Tanning Bed provides a Ruby interface for the Solr (http://lucene.apache.org/solr/) search engine to use in you're models not matter whether they are Datamapper, Active Record, Couchrest or just general Ruby classes.
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This is the solr binary packaged up for easy inclusion with Tanning Bed
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