Project

find_beads

0.0
No commit activity in last 3 years
No release in over 3 years
find_beadscjfuller/find_beadsHomepageDocumentationSource CodeBug TrackerWiki
Segments and quantifies beads in microscopy images
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 Popularity
Downloads
24,970
Stars
0
Forks
0
Watchers
3
 Releases
Current version
0.9.6
Total releases
8
First release
2013-02-02
Latest release
2013-02-02
 Issues
Open Issues
0
Closed Issues
1
Total Issues
1
Issue Closure Rate
100%
 Development
Primary Language
Scala
Licenses
MIT
Average date of last 50 commits
2013-07-30
Reverse Dependencies
0

 Dependencies

Runtime

rimageanalysistools
>= 0
trollop
>= 0
 Project Readme

#Introduction

Script to segment and quantify beads in microscopy images.

#Installation

You'll need java; this has only been tested on Java 8.

Download the executable jar file here: https://storage.googleapis.com/find-beads-dist/find-beads-1.0

On OSX / linux, you can run chmod u+x find-beads-1.0 to run it as if it's an executable itself.

#Running find-beads-1.0 --help or java -jar find-beads-1.0 --help

for usage instructions.

#Building from source You'll need Scala (tested only with 2.11) and sbt.

sbt assembly will build an executable jar with all dependencies.

#License

Find_beads is distrubuted under the MIT/X11 license. See the full text in the LICENSE file for more details. Some dependencies are distributed under different licenses. See their project pages for more details.