Project

solvebio

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SolveBio is a platform for biomedical datasets. With SolveBio you can forget about parsing complex flat files and sifting through cryptic datasets. Just use the Ruby Client and API to explore massive datasets and automate just about any bioinformatics workflow. See https://www.solvebio.com/ for more information.
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 Popularity
Downloads
34,949
Stars
3
Forks
0
Watchers
18
 Releases
Current version
1.9.0
Total releases
15
First release
2014-08-16
Latest release
2016-03-28
 Issues
Open Issues
4
Closed Issues
3
Total Issues
7
Issue Closure Rate
42%
 Pull Requests
Open Pull Requests
0
Closed Pull Requests
2
Merged Pull Requests
14
Pull Request Acceptance Rate
87%
 Development
Primary Language
Ruby
Licenses
MIT
Average date of last 50 commits
2015-05-14
Reverse Dependencies
0

 Dependencies

Development

rake
>= 0
rdoc
>= 0
webmock
>= 0

Runtime

addressable
>= 2.3.6, ~> 2.3
netrc
~> 0.7
rest-client
>= 1.7.3, ~> 1.7
 Project Readme

Build Status

SolveBio Ruby Client

Deprecation Notice

As of July 28th, 2017 the SolveBio Ruby client will officially be unsupported. Many of the endpoints in use have been deprecated. Please contact SolveBio with any questions.

About

This is the SolveBio Ruby module and command-line interface (CLI).

For more information about SolveBio, see solvebio.com.

Guided Installation

To use the guided installer, open up your terminal and paste this:

curl -skL install.solvebio.com/ruby | bash

Manual Installation

sudo gem install solvebio

Installing from Git

First, install dependencies:

gem install rest-client addressable netrc

Install from source:

git clone https://github.com/solvebio/solvebio-ruby.git
cd solvebio-ruby
rake test
sudo rake install

This will install the solvebio gem and the solvebio.rb CLI.

Optional Dependencies

The following optional gems can make your shell experience better

  • bond

    Better command completion

  • launchy

    Opens help URLs in a web browser tab

  • rb18n-core

    Localization for number formatting

Documentation

See the SolveBio API Reference for more information about using the API.