Project
Reverse Dependencies for bio-samtools
The projects listed here declare bio-samtools as a runtime or development dependency
0.02
bio-ngs provides a framework for handling NGS data with BioRuby
2019
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0.02
bio-ngs provides a framework for handling NGS data with BioRuby
2019
2020
2021
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2024
0.01
Repository of tools developed at Crop Genetics in JIC to work with polyploid wheat
2019
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2024
0.0
A parser for CIGAR format alignments.
2019
2020
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0.0
BioRuby plugins with dependecies from external library or tools
2019
2020
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2024
0.0
Identify causative mutations in a model genome from NGS reads using the NGM method.
2019
2020
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2024
0.0
Identify causative mutations in a model genome from NGS reads using the NGM method.
2019
2020
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2024
0.0
Iterate through a samtools pileup file
2019
2020
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2024
0.0
Simple classes for parsing SAM, CIGAR and MD:Z strings, including slices. Methods for calling mutations in HGVS format and looking up consequences using Ensembl VEP REST API. Developed for calling mutations at an expected position in an alignment - e.g. Amplicon sequencing of CRISPR-induced mutat...
2019
2020
2021
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2024
0.0
A minimal web service on the top of sinatra to query bam files
2019
2020
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2024
0.0
a library and commandline tool to pick causative mutation from bulks segregant sequencing
2019
2020
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0.0
Calculated a metric that estimates read complexity at each base for RNA-seq BAM files. Alternative to pileup format.
2019
2020
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0.0
A variance calling tool for NGS
2019
2020
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2024
0.0
A variance calling tool for NGS
2019
2020
2021
2022
2023
2024